WebSVN – bdplot – Diff – /bdgraphics/R/4_bdplot.R


### bdplot.R
#### This is a collection of functions that must bpre reachable by the user This is called 
 
 
 
## strategy missing for xytype
## Could we test if there is an active graphics device? And if not, run bdopen()?
bdplot <- function(x, y=NULL, z=NULL,
                   ## The rest is irrelevant for the user
                   cex.plot=bdp()$cex.plot,
                   xaxt="n",
                   xlab=bdp()$xlab, ylab=bdp()$ylab,
                   xlim=NULL,
                   ylim=NULL,
                   col=bdp()$col,main=NULL,
                   ## only used in case of plot mode
                   type=bdp()$type,
                   ## Only used in case of histogram plotting
                   border=bdp()$border,
                   ...)
{
  prm <- bdp()
 
 
  par(cex.main=prm$cex.main, cex.lab=prm$cex.lab, cex.axis=prm$cex.axis)
  par(tcl=prm$tcl)
  par(lwd=prm$lwd)
  par(bty=prm$bty)
 
  
  ##Set margins
  mar <- prm$mar.nolab
  if( !is.na(prm$xlab) ){ mar[1] <- prm$mar.lab[1] }
  if( !is.na(prm$ylab) ){ mar[2] <- prm$mar.lab[2] }
  if( any(!is.na(prm$toplab),!is.null(main)) ) { mar[3] <- prm$mar.lab[3] }
  if( !is.na(prm$rightlab) ){ mar[4] <- prm$mar.lab[4] }
  par(mar=mar)
 
  par(mgp=prm$mgp.global)
  
  ## Do the plot
  if(!is.null(y)){
    ##       cat("The Bacher/Delff Plotting System (R), (C), TM operating in xy-plotting mode.\n")
 
    if(is.null(xlim))
      xlim <- range(x,bdp()$xlim,na.rm=TRUE)
    if(is.null(ylim))
      ylim <- range(y,bdp()$ylim,na.rm=TRUE)
    
    plot(x, y,
         type=type,
         xaxt=xaxt, yaxt="n",
         cex=cex.plot,
         xlab=xlab,
         ylab=ylab,
         xlim=xlim,
         ylim=ylim,
         col=col,
         main=main,
         ...)
  } else if (is.numeric(x)){
    if(prm$method=="barplot"){
      barplot(height=x,
              ## maybe these two are wrong/stupid?
              cex.axis=prm$cex.lab,
              cex.names=prm$cex.lab,
              col=bdp()$hcol,
              border=border,
              xlab=xlab,
              ylab=ylab,
              main=main,
              ...)
      prm$draw.xaxis <- FALSE
      prm$draw.yaxis <- FALSE
      
    } else {
 
      if(is.null(xlim))
        xlim <- range(c(1:length(x),bdp()$xlim),na.rm=TRUE)
 
      if(is.null(ylim))
        ylim <- range(x,bdp()$ylim,na.rm=TRUE)
      
      plot(x,
           type=type,
           xaxt="n", yaxt="n",
           cex=cex.plot,
           xlab=xlab,
           ylab=ylab,
           xlim=xlim,
           ylim=ylim,
           col=col,
           main=main,
           ...)
    }
  } else if( class(x) == "acf"){
    ## Not cleaned up/checked
    plot(x, xlab="", ylab="", xaxt="n", yaxt="n", cex=prm$cex.plot, xlim=prm$xlim, ylim=prm$ylim,col=col,...)
  }
  else if( class(x) == "histogram"){
    ## Notice: the color of the bars can ONLY be set width bdp(hcol="color").
    plot(x,
         xlab=xlab, ylab=ylab,
         main=prm$main,
         xaxt="n",yaxt="n",col=bdp()$hcol,
         border=border,
         ...)
  } else if( class(x) == "trellis"){
    ## Not cleaned up/checked
    ## very experimental
    cat("The Bacher/Delff Plotting System (R), (C), TM operating in lattice mode.\n Remeber that labels must written in the lattice object.\n")
    ##lattice.options(layout.widths = prm$lattice.width,
    ##                layout.heights = prm$lattice.height)
    trellis.par.set(prm$myLatticeSettings()) 
    plot(x,col=col,...)
    ## with lattice/trellis, the axis drawing doesn't work.
    prm$draw.xaxis <- FALSE
    prm$draw.yaxis <- FALSE
  }
  else if (prm$method=="image.plot"){
    ### This could be checked in the beginning by is.null(z)
    cat("The Bacher/Delff Plotting System (R), (C), TM operating in image plotting mode.\nx and y axis can not be configured.\n")
    image.plot(x=x,y=y,z=z,
               xlab=xlab,
               ylab=ylab,
               ...)
  }
  
  ## We could make default values for grid.v og grid.h. Man maa kunne lave noget kvalificeret ud fra range og noget heltalsdivision
  
  ##Grid stuff
  if( prm$grid ){
    grid(col=prm$grid.col)
  }
  ## vertical lines
  if( !is.na(prm$grid.v) ){
    if(prm$grid.v=="Def"){
      grid(nx=NULL,ny=NA,col=prm$grid.col)
    } else
    {
      abline(v=prm$grid.v, lty="dotted", col=prm$grid.col)
    }
  }
 
  if( !is.na(prm$grid.h) ){
    if(prm$grid.h=="Def"){
      grid(nx=NA,ny=NULL,col=prm$grid.col)
    }else{
      abline(h=prm$grid.h, lty="dotted", col=prm$grid.col)}
    }
 
  ## Axis stuff
  if(prm$draw.xaxis){
    ##    mgp.old <- par()$mgp
    ##    par(mgp) <- mgp.xaxis
    options(warn=-1)
    if( "POSIXt"%in%class(x[1])){
      axis.POSIXct(1, x,mgp=prm$mgp.xaxis, lwd=prm$lwd)
    } else {
      axis(1, mgp=prm$mgp.xaxis, lwd=prm$lwd)
    }
    options(warn=0)
    
  }
  if(prm$draw.yaxis){ axis(2, mgp=prm$mgp.yaxis, lwd=prm$lwd) }
  ## axis to the right
  if(prm$draw.raxis){ axis(4, mgp=prm$mgp.raxis, lwd=prm$lwd) }
  ##Title stuff
  ## Hvorfor??
  scale <- 1
  ##  if( prm$type=="hist" & !is.na(prm$xlab) )
#  if( !is.na(prm$xlab)  ){ mtext(prm$xlab, line=prm$xlabLine, side=1, cex=prm$cex.lab/scale) }
  ##  if( prm$type=="hist" &!is.na(prm$ylab) )
#  if( !is.na(prm$ylab)  ){ mtext(prm$ylab, line=prm$ylabLine, side=2, cex=prm$cex.lab/scale) }
  if( !is.na(prm$toplab) ){ mtext(prm$toplab, side=3, line=0.25, cex=prm$cex.lab/scale) }
  if( !is.na(prm$rightlab) ){
    mtext(prm$rightlab, side=4, line=0.75, cex=prm$cex.lab/scale,mgp=prm$mgp.raxis)
##    mtext(rightlab, side=4, line=0.5, cex=bdp()$cex.lab,mgp=bdp()$mgp.raxis)
  }
}
 
 
 
 

Rev 21	Rev 22
1	`### bdplot.R`	1	`### bdplot.R`
2	`#### This is a collection of functions that must bpre reachable by the user This is called`	2	`#### This is a collection of functions that must bpre reachable by the user This is called`
3		3
4		4
5		5
6	`## strategy missing for xytype`	6	`## strategy missing for xytype`
7	`## Could we test if there is an active graphics device? And if not, run bdopen()?`	7	`## Could we test if there is an active graphics device? And if not, run bdopen()?`
8	`bdplot <- function(x, y=NULL, z=NULL,`	8	`bdplot <- function(x, y=NULL, z=NULL,`
9	`## The rest is irrelevant for the user`	9	`## The rest is irrelevant for the user`
10	`cex.plot=bdp()$cex.plot,`	10	`cex.plot=bdp()$cex.plot,`
11	`xaxt="n",`	11	`xaxt="n",`
12	`xlab=bdp()$xlab, ylab=bdp()$ylab,`	12	`xlab=bdp()$xlab, ylab=bdp()$ylab,`
13	`xlim=range(x,bdp()$xlim,na.rm=TRUE),`	13	`xlim=NULL,`
14	`ylim=range(bdp()$ylim,y,na.rm=TRUE),`	14	`ylim=NULL,`
15	`col=bdp()$col,main=NULL,`	15	`col=bdp()$col,main=NULL,`
16	`## only used in case of plot mode`	16	`## only used in case of plot mode`
17	`type=bdp()$type,`	17	`type=bdp()$type,`
18	`## Only used in case of histogram plotting`	18	`## Only used in case of histogram plotting`
19	`border=bdp()$border,`	19	`border=bdp()$border,`
20	`...)`	20	`...)`
21	`{`	21	`{`
22	`prm <- bdp()`	22	`prm <- bdp()`
23		23
24		24
25	`par(cex.main=prm$cex.main, cex.lab=prm$cex.lab, cex.axis=prm$cex.axis)`	25	`par(cex.main=prm$cex.main, cex.lab=prm$cex.lab, cex.axis=prm$cex.axis)`
26	`par(tcl=prm$tcl)`	26	`par(tcl=prm$tcl)`
27	`par(lwd=prm$lwd)`	27	`par(lwd=prm$lwd)`
28	`par(bty=prm$bty)`	28	`par(bty=prm$bty)`
29		29
30		30
31	`##Set margins`	31	`##Set margins`
32	`mar <- prm$mar.nolab`	32	`mar <- prm$mar.nolab`
33	`if( !is.na(prm$xlab) ){ mar[1] <- prm$mar.lab[1] }`	33	`if( !is.na(prm$xlab) ){ mar[1] <- prm$mar.lab[1] }`
34	`if( !is.na(prm$ylab) ){ mar[2] <- prm$mar.lab[2] }`	34	`if( !is.na(prm$ylab) ){ mar[2] <- prm$mar.lab[2] }`
35	`if( any(!is.na(prm$toplab),!is.null(main)) ) { mar[3] <- prm$mar.lab[3] }`	35	`if( any(!is.na(prm$toplab),!is.null(main)) ) { mar[3] <- prm$mar.lab[3] }`
36	`if( !is.na(prm$rightlab) ){ mar[4] <- prm$mar.lab[4] }`	36	`if( !is.na(prm$rightlab) ){ mar[4] <- prm$mar.lab[4] }`
37	`par(mar=mar)`	37	`par(mar=mar)`
38		38
39	`par(mgp=prm$mgp.global)`	39	`par(mgp=prm$mgp.global)`
40		40
41	`## Do the plot`	41	`## Do the plot`
42	`if(!is.null(y)){`	42	`if(!is.null(y)){`
43	`## cat("The Bacher/Delff Plotting System (R), (C), TM operating in xy-plotting mode.\n")`	43	`## cat("The Bacher/Delff Plotting System (R), (C), TM operating in xy-plotting mode.\n")`
-		44
-		45	`if(is.null(xlim))`
-		46	`xlim <- range(x,bdp()$xlim,na.rm=TRUE)`
-		47	`if(is.null(ylim))`
-		48	`ylim <- range(y,bdp()$ylim,na.rm=TRUE)`
44		49
45	`plot(x, y,`	50	`plot(x, y,`
46	`type=type,`	51	`type=type,`
47	`xaxt=xaxt, yaxt="n",`	52	`xaxt=xaxt, yaxt="n",`
48	`cex=cex.plot,`	53	`cex=cex.plot,`
49	`xlab=xlab,`	54	`xlab=xlab,`
50	`ylab=ylab,`	55	`ylab=ylab,`
51	`xlim=xlim,`	56	`xlim=xlim,`
52	`ylim=ylim,`	57	`ylim=ylim,`
53	`col=col,`	58	`col=col,`
54	`main=main,`	59	`main=main,`
55	`...)`	60	`...)`
56	`} else if (is.numeric(x)){`	61	`} else if (is.numeric(x)){`
57	`if(prm$method=="barplot"){`	62	`if(prm$method=="barplot"){`
58	`barplot(height=x,`	63	`barplot(height=x,`
59	`## maybe these two are wrong/stupid?`	64	`## maybe these two are wrong/stupid?`
60	`cex.axis=prm$cex.lab,`	65	`cex.axis=prm$cex.lab,`
61	`cex.names=prm$cex.lab,`	66	`cex.names=prm$cex.lab,`
62	`col=bdp()$hcol,`	67	`col=bdp()$hcol,`
63	`border=border,`	68	`border=border,`
64	`xlab=xlab,`	69	`xlab=xlab,`
65	`ylab=ylab,`	70	`ylab=ylab,`
66	`main=main,`	71	`main=main,`
67	`...)`	72	`...)`
68	`prm$draw.xaxis <- FALSE`	73	`prm$draw.xaxis <- FALSE`
69	`prm$draw.yaxis <- FALSE`	74	`prm$draw.yaxis <- FALSE`
70		75
71	`} else {`	76	`} else {`
-		77
-		78	`if(is.null(xlim))`
-		79	`xlim <- range(c(1:length(x),bdp()$xlim),na.rm=TRUE)`
-		80
-		81	`if(is.null(ylim))`
-		82	`ylim <- range(x,bdp()$ylim,na.rm=TRUE)`
-		83
72	`plot(x,`	84	`plot(x,`
73	`type=type,`	85	`type=type,`
74	`xaxt="n", yaxt="n",`	86	`xaxt="n", yaxt="n",`
75	`cex=cex.plot,`	87	`cex=cex.plot,`
76	`xlab=xlab,`	88	`xlab=xlab,`
77	`ylab=ylab,`	89	`ylab=ylab,`
-		90	`xlim=xlim,`
78	`ylim=ylim,`	91	`ylim=ylim,`
79	`col=col,`	92	`col=col,`
80	`main=main,`	93	`main=main,`
81	`...)`	94	`...)`
82	`}`	95	`}`
83	`} else if( class(x) == "acf"){`	96	`} else if( class(x) == "acf"){`
84	`## Not cleaned up/checked`	97	`## Not cleaned up/checked`
85	`plot(x, xlab="", ylab="", xaxt="n", yaxt="n", cex=prm$cex.plot, xlim=prm$xlim, ylim=prm$ylim,col=col,...)`	98	`plot(x, xlab="", ylab="", xaxt="n", yaxt="n", cex=prm$cex.plot, xlim=prm$xlim, ylim=prm$ylim,col=col,...)`
86	`}`	99	`}`
87	`else if( class(x) == "histogram"){`	100	`else if( class(x) == "histogram"){`
88	`## Notice: the color of the bars can ONLY be set width bdp(hcol="color").`	101	`## Notice: the color of the bars can ONLY be set width bdp(hcol="color").`
89	`plot(x,`	102	`plot(x,`
90	`xlab=xlab, ylab=ylab,`	103	`xlab=xlab, ylab=ylab,`
91	`main=prm$main,`	104	`main=prm$main,`
92	`xaxt="n",yaxt="n",col=bdp()$hcol,`	105	`xaxt="n",yaxt="n",col=bdp()$hcol,`
93	`border=border,`	106	`border=border,`
94	`...)`	107	`...)`
95	`} else if( class(x) == "trellis"){`	108	`} else if( class(x) == "trellis"){`
96	`## Not cleaned up/checked`	109	`## Not cleaned up/checked`
97	`## very experimental`	110	`## very experimental`
98	`cat("The Bacher/Delff Plotting System (R), (C), TM operating in lattice mode.\n Remeber that labels must written in the lattice object.\n")`	111	`cat("The Bacher/Delff Plotting System (R), (C), TM operating in lattice mode.\n Remeber that labels must written in the lattice object.\n")`
99	`##lattice.options(layout.widths = prm$lattice.width,`	112	`##lattice.options(layout.widths = prm$lattice.width,`
100	`## layout.heights = prm$lattice.height)`	113	`## layout.heights = prm$lattice.height)`
101	`trellis.par.set(prm$myLatticeSettings())`	114	`trellis.par.set(prm$myLatticeSettings())`
102	`plot(x,col=col,...)`	115	`plot(x,col=col,...)`
103	`## with lattice/trellis, the axis drawing doesn't work.`	116	`## with lattice/trellis, the axis drawing doesn't work.`
104	`prm$draw.xaxis <- FALSE`	117	`prm$draw.xaxis <- FALSE`
105	`prm$draw.yaxis <- FALSE`	118	`prm$draw.yaxis <- FALSE`
106	`}`	119	`}`
107	`else if (prm$method=="image.plot"){`	120	`else if (prm$method=="image.plot"){`
108	`### This could be checked in the beginning by is.null(z)`	121	`### This could be checked in the beginning by is.null(z)`
109	`cat("The Bacher/Delff Plotting System (R), (C), TM operating in image plotting mode.\nx and y axis can not be configured.\n")`	122	`cat("The Bacher/Delff Plotting System (R), (C), TM operating in image plotting mode.\nx and y axis can not be configured.\n")`
110	`image.plot(x=x,y=y,z=z,`	123	`image.plot(x=x,y=y,z=z,`
111	`xlab=xlab,`	124	`xlab=xlab,`
112	`ylab=ylab,`	125	`ylab=ylab,`
113	`...)`	126	`...)`
114	`}`	127	`}`
115		128
116	`## We could make default values for grid.v og grid.h. Man maa kunne lave noget kvalificeret ud fra range og noget heltalsdivision`	129	`## We could make default values for grid.v og grid.h. Man maa kunne lave noget kvalificeret ud fra range og noget heltalsdivision`
117		130
118	`##Grid stuff`	131	`##Grid stuff`
119	`if( prm$grid ){`	132	`if( prm$grid ){`
120	`grid(col=prm$grid.col)`	133	`grid(col=prm$grid.col)`
121	`}`	134	`}`
122	`## vertical lines`	135	`## vertical lines`
123	`if( !is.na(prm$grid.v) ){`	136	`if( !is.na(prm$grid.v) ){`
124	`if(prm$grid.v=="Def"){`	137	`if(prm$grid.v=="Def"){`
125	`grid(nx=NULL,ny=NA,col=prm$grid.col)`	138	`grid(nx=NULL,ny=NA,col=prm$grid.col)`
126	`} else`	139	`} else`
127	`{`	140	`{`
128	`abline(v=prm$grid.v, lty="dotted", col=prm$grid.col)`	141	`abline(v=prm$grid.v, lty="dotted", col=prm$grid.col)`
129	`}`	142	`}`
130	`}`	143	`}`
131		144
132	`if( !is.na(prm$grid.h) ){`	145	`if( !is.na(prm$grid.h) ){`
133	`if(prm$grid.h=="Def"){`	146	`if(prm$grid.h=="Def"){`
134	`grid(nx=NA,ny=NULL,col=prm$grid.col)`	147	`grid(nx=NA,ny=NULL,col=prm$grid.col)`
135	`}else{`	148	`}else{`
136	`abline(h=prm$grid.h, lty="dotted", col=prm$grid.col)}`	149	`abline(h=prm$grid.h, lty="dotted", col=prm$grid.col)}`
137	`}`	150	`}`
138		151
139	`## Axis stuff`	152	`## Axis stuff`
140	`if(prm$draw.xaxis){`	153	`if(prm$draw.xaxis){`
141	`## mgp.old <- par()$mgp`	154	`## mgp.old <- par()$mgp`
142	`## par(mgp) <- mgp.xaxis`	155	`## par(mgp) <- mgp.xaxis`
143	`options(warn=-1)`	156	`options(warn=-1)`
144	`if( "POSIXt"%in%class(x[1])){`	157	`if( "POSIXt"%in%class(x[1])){`
145	`axis.POSIXct(1, x,mgp=prm$mgp.xaxis, lwd=prm$lwd)`	158	`axis.POSIXct(1, x,mgp=prm$mgp.xaxis, lwd=prm$lwd)`
146	`} else {`	159	`} else {`
147	`axis(1, mgp=prm$mgp.xaxis, lwd=prm$lwd)`	160	`axis(1, mgp=prm$mgp.xaxis, lwd=prm$lwd)`
148	`}`	161	`}`
149	`options(warn=0)`	162	`options(warn=0)`
150		163
151	`}`	164	`}`
152	`if(prm$draw.yaxis){ axis(2, mgp=prm$mgp.yaxis, lwd=prm$lwd) }`	165	`if(prm$draw.yaxis){ axis(2, mgp=prm$mgp.yaxis, lwd=prm$lwd) }`
153	`## axis to the right`	166	`## axis to the right`
154	`if(prm$draw.raxis){ axis(4, mgp=prm$mgp.raxis, lwd=prm$lwd) }`	167	`if(prm$draw.raxis){ axis(4, mgp=prm$mgp.raxis, lwd=prm$lwd) }`
155	`##Title stuff`	168	`##Title stuff`
156	`## Hvorfor??`	169	`## Hvorfor??`
157	`scale <- 1`	170	`scale <- 1`
158	`## if( prm$type=="hist" & !is.na(prm$xlab) )`	171	`## if( prm$type=="hist" & !is.na(prm$xlab) )`
159	`# if( !is.na(prm$xlab) ){ mtext(prm$xlab, line=prm$xlabLine, side=1, cex=prm$cex.lab/scale) }`	172	`# if( !is.na(prm$xlab) ){ mtext(prm$xlab, line=prm$xlabLine, side=1, cex=prm$cex.lab/scale) }`
160	`## if( prm$type=="hist" &!is.na(prm$ylab) )`	173	`## if( prm$type=="hist" &!is.na(prm$ylab) )`
161	`# if( !is.na(prm$ylab) ){ mtext(prm$ylab, line=prm$ylabLine, side=2, cex=prm$cex.lab/scale) }`	174	`# if( !is.na(prm$ylab) ){ mtext(prm$ylab, line=prm$ylabLine, side=2, cex=prm$cex.lab/scale) }`
162	`if( !is.na(prm$toplab) ){ mtext(prm$toplab, side=3, line=0.25, cex=prm$cex.lab/scale) }`	175	`if( !is.na(prm$toplab) ){ mtext(prm$toplab, side=3, line=0.25, cex=prm$cex.lab/scale) }`
163	`if( !is.na(prm$rightlab) ){`	176	`if( !is.na(prm$rightlab) ){`
164	`mtext(prm$rightlab, side=4, line=0.75, cex=prm$cex.lab/scale,mgp=prm$mgp.raxis)`	177	`mtext(prm$rightlab, side=4, line=0.75, cex=prm$cex.lab/scale,mgp=prm$mgp.raxis)`
165	`## mtext(rightlab, side=4, line=0.5, cex=bdp()$cex.lab,mgp=bdp()$mgp.raxis)`	178	`## mtext(rightlab, side=4, line=0.5, cex=bdp()$cex.lab,mgp=bdp()$mgp.raxis)`
166	`}`	179	`}`
167	`}`	180	`}`
168		181
169		182
170		183
171		184

Subversion Repositories bdplot

(root)/bdgraphics/R/4_bdplot.R – Rev 21 → 22