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176 7124 d 22 h bj /branches/restructuring/ updated VS projects and solution  
/branches/restructuring/GEL.sln
/branches/restructuring/apps/BloomenthalPolygonize/BloomenthalPolygonize.vcproj
/branches/restructuring/apps/BoundaryCollapse/BoundaryCollapse.vcproj
/branches/restructuring/apps/Decimator/Decimator.vcproj
/branches/restructuring/apps/OBJViewer/OBJViewer.vcproj
/branches/restructuring/apps/VolumePolygonize/VolumePolygonize.vcproj
/branches/restructuring/makefiles/GELapp.mpc
/branches/restructuring/src/CGLA/CGLA.vcproj
/branches/restructuring/src/GLGraphics/GLGraphics.vcproj
/branches/restructuring/src/Geometry/Geometry.vcproj
/branches/restructuring/src/HMesh/HMesh.vcproj
/branches/restructuring/src/LinAlg/LinAlg.vcproj
/branches/restructuring/src/Util/Util.vcproj
/branches/restructuring/test/CGLA-covariance/CGLA_covariance.vcproj
/branches/restructuring/test/CGLA-mat/CGLA_mat.vcproj
/branches/restructuring/test/CGLA-ogl/CGLA_ogl.vcproj
/branches/restructuring/test/CGLA-simple/CGLA_simple.vcproj
/branches/restructuring/test/CGLA-vec/CGLA_vec.vcproj
/branches/restructuring/test/Geometry-kdtree/Geometry_kdtree.vcproj
/branches/restructuring/test/LinAlg-leastsq/LinAlg_leastsq.vcproj
/branches/restructuring/test/Util-resman/Util_resman.vcproj
174 7124 d 22 h bj /branches/restructuring/src/ reomved IMesh and IMeshUtil  
/branches/restructuring/src/IMeshUtil
173 7124 d 22 h bj /branches/restructuring/src/ reomved IMesh and IMeshUtil  
/branches/restructuring/src/IMesh
172 7126 d 13 h jab /branches/restructuring/src/HMesh/ slight change: bug fix  
/branches/restructuring/src/HMesh/mesh_optimization.cpp
170 7128 d 13 h jab /branches/restructuring/ some changes to mesh_optimization.
Many changes to fair_polygonization. It is beginning to be nice		  
/branches/restructuring/apps/VolumePolygonize/volpoly.cpp
/branches/restructuring/src/HMesh/Manifold.cpp
/branches/restructuring/src/HMesh/fair_polygonize.cpp
/branches/restructuring/src/HMesh/fair_polygonize.h
/branches/restructuring/src/HMesh/mesh_optimization.cpp
169 7130 d 20 h jab /branches/restructuring/ Many important changes to the polygonizer.  
/branches/restructuring/apps/VolumePolygonize/volpoly.cpp
/branches/restructuring/src/GLGraphics/GLViewController.h
/branches/restructuring/src/GLGraphics/QuatTrackBall.h
/branches/restructuring/src/HMesh/fair_polygonize.cpp
/branches/restructuring/src/HMesh/fair_polygonize.h
167 7138 d 21 h jab /branches/restructuring/src/GLGraphics/ Added draw functions  
/branches/restructuring/src/GLGraphics/draw.cpp
/branches/restructuring/src/GLGraphics/draw.h
162 7141 d 16 h jab /branches/restructuring/src/HMesh/ I have added a constructor to each of the circulator classes which takes a
halfedge as argument. Useful to create a circulator which starts at a particular
location.		  
/branches/restructuring/src/HMesh/FaceCirculator.h
/branches/restructuring/src/HMesh/VertexCirculator.h
161 7155 d 4 h jab /branches/restructuring/ Regenerated the vcproj files.  
/branches/restructuring/src/GLGraphics/GLGraphics.vcproj
/branches/restructuring/GEL.sln
/branches/restructuring/apps/BloomenthalPolygonize/BloomenthalPolygonize.vcproj
/branches/restructuring/apps/BoundaryCollapse/BoundaryCollapse.vcproj
/branches/restructuring/apps/Decimator/Decimator.vcproj
/branches/restructuring/apps/IMeshViewer/IMeshViewer.vcproj
/branches/restructuring/apps/OBJViewer/OBJViewer.vcproj
/branches/restructuring/apps/VolumePolygonize/VolumePolygonize.vcproj
/branches/restructuring/src/CGLA/CGLA.vcproj
/branches/restructuring/src/Geometry/Geometry.vcproj
/branches/restructuring/src/HMesh/HMesh.vcproj
/branches/restructuring/src/IMesh/IMesh.vcproj
/branches/restructuring/src/IMeshUtil/IMeshUtil.vcproj
/branches/restructuring/src/LinAlg/LinAlg.vcproj
/branches/restructuring/src/Util/Util.vcproj
/branches/restructuring/test/CGLA-covariance/CGLA_covariance.vcproj
/branches/restructuring/test/CGLA-mat/CGLA_mat.vcproj
/branches/restructuring/test/CGLA-ogl/CGLA_ogl.vcproj
/branches/restructuring/test/CGLA-simple/CGLA_simple.vcproj
/branches/restructuring/test/CGLA-vec/CGLA_vec.vcproj
/branches/restructuring/test/Geometry-kdtree/Geometry_kdtree.vcproj
/branches/restructuring/test/LinAlg-leastsq/LinAlg_leastsq.vcproj
/branches/restructuring/test/Util-resman/Util_resman.vcproj
160 7156 d 4 h jab /branches/restructuring/src/HMesh/ Fixed a nasty little bug in Manifold safe_triangulate did not correctly position
new vertices at the centre.		  
/branches/restructuring/src/HMesh/Manifold.cpp
159 7156 d 15 h jab /branches/restructuring/src/ Mostly new documentation and a bug fix in cgla isnan would call itself recursively  
/branches/restructuring/src/CGLA/CGLA.h
/branches/restructuring/src/HMesh/Manifold.h
/branches/restructuring/src/HMesh/VertexCirculator.h
158 7157 d 1 h jab /branches/restructuring/ A delayed removal mode has been added to Manifold.  
/branches/restructuring/apps/Decimator/decimator.cpp
/branches/restructuring/src/HMesh/Manifold.cpp
/branches/restructuring/src/HMesh/Manifold.h
156 7160 d 2 h jab /branches/restructuring/src/ Somehow gel.doxygen got erased. I added it back.

Many changes to Geometry::TriMesh		  
/branches/restructuring/src/gel.doxygen
/branches/restructuring/src/GLGraphics/Makefile
/branches/restructuring/src/Geometry/IndexedFaceSet.h
/branches/restructuring/src/Geometry/Material.h
/branches/restructuring/src/Geometry/TriMesh.cpp
/branches/restructuring/src/Geometry/TriMesh.h
/branches/restructuring/src/Geometry/obj_load.cpp
155 7160 d 2 h jab /branches/restructuring/src/HMesh/ Took the chance to make some changes to Manifold which used to be a struct
and is now a class.

Also the collapse and precond functions now longer take the redundant
vertexIter arg.		  
/branches/restructuring/src/HMesh/Manifold.cpp
/branches/restructuring/src/HMesh/Manifold.h
/branches/restructuring/src/HMesh/build_manifold.cpp
/branches/restructuring/src/HMesh/caps_and_needles.cpp
/branches/restructuring/src/HMesh/fair_polygonize.cpp
/branches/restructuring/src/HMesh/fair_polygonize.h
/branches/restructuring/src/HMesh/quadric_simplify.cpp
153 7160 d 21 h jab /branches/restructuring/ Minor changes.  
/branches/restructuring/README
/branches/restructuring/src/Geometry/Material.h
/branches/restructuring/src/Geometry/TriMesh.h
152 7160 d 21 h jab /branches/restructuring/src/GLGraphics/ Texmap is going altogether.  
/branches/restructuring/src/GLGraphics/Texmap.cpp
/branches/restructuring/src/GLGraphics/Texmap.h
/branches/restructuring/src/GLGraphics/GLViewController.cpp
/branches/restructuring/src/GLGraphics/GLViewController.h
/branches/restructuring/src/GLGraphics/QuatTrackBall.cpp
/branches/restructuring/src/GLGraphics/QuatTrackBall.h
/branches/restructuring/src/GLGraphics/SimpleTrackBall.cpp
/branches/restructuring/src/GLGraphics/SimpleTrackBall.h
151 7161 d 1 h jab /branches/restructuring/src/ Junk  
/branches/restructuring/src/Graphics
150 7161 d 1 h jab /branches/restructuring/src/ Many files have been moved.  
/branches/restructuring/src/GLGraphics/Texmap.cpp
/branches/restructuring/src/GLGraphics/Texmap.h
/branches/restructuring/src/Geometry/Texmap.cpp
/branches/restructuring/src/Geometry/Texmap.h
/branches/restructuring/src/HMesh/build_manifold.cpp
/branches/restructuring/src/HMesh/build_manifold.h
/branches/restructuring/src/HMesh/caps_and_needles.cpp
/branches/restructuring/src/HMesh/caps_and_needles.h
/branches/restructuring/src/HMesh/mesh_optimization.cpp
/branches/restructuring/src/HMesh/mesh_optimization.h
/branches/restructuring/src/HMesh/obj_load.cpp
/branches/restructuring/src/HMesh/obj_load.h
/branches/restructuring/src/HMesh/obj_save.cpp
/branches/restructuring/src/HMesh/obj_save.h
/branches/restructuring/src/HMesh/quadric_simplify.cpp
/branches/restructuring/src/HMesh/quadric_simplify.h
/branches/restructuring/src/HMesh/refine_edges.cpp
/branches/restructuring/src/HMesh/refine_edges.h
/branches/restructuring/src/HMesh/smooth.cpp
/branches/restructuring/src/HMesh/smooth.h
/branches/restructuring/src/HMesh/triangulate.cpp
/branches/restructuring/src/HMesh/triangulate.h
/branches/restructuring/src/HMesh/triangulate_face_order.cpp
/branches/restructuring/src/HMesh/x3d_load.cpp
/branches/restructuring/src/HMesh/x3d_load.h
/branches/restructuring/src/HMesh/x3d_save.cpp
/branches/restructuring/src/HMesh/x3d_save.h
149 7161 d 1 h jab /branches/restructuring/src/HMesh/ A lot of stuff previously in the Util library has been moved here.  
/branches/restructuring/src/HMesh/build_manifold.cpp
/branches/restructuring/src/HMesh/build_manifold.h
/branches/restructuring/src/HMesh/caps_and_needles.cpp
/branches/restructuring/src/HMesh/caps_and_needles.h
/branches/restructuring/src/HMesh/fair_polygonize.cpp
/branches/restructuring/src/HMesh/fair_polygonize.h
/branches/restructuring/src/HMesh/mesh_optimization.cpp
/branches/restructuring/src/HMesh/mesh_optimization.h
/branches/restructuring/src/HMesh/obj_load.cpp
/branches/restructuring/src/HMesh/obj_load.h
/branches/restructuring/src/HMesh/obj_save.cpp
/branches/restructuring/src/HMesh/obj_save.h
/branches/restructuring/src/HMesh/quadric_simplify.cpp
/branches/restructuring/src/HMesh/quadric_simplify.h
/branches/restructuring/src/HMesh/refine_edges.cpp
/branches/restructuring/src/HMesh/refine_edges.h
/branches/restructuring/src/HMesh/smooth.cpp
/branches/restructuring/src/HMesh/smooth.h
/branches/restructuring/src/HMesh/triangulate.cpp
/branches/restructuring/src/HMesh/triangulate.h
/branches/restructuring/src/HMesh/triangulate_face_order.cpp
/branches/restructuring/src/HMesh/x3d_load.cpp
/branches/restructuring/src/HMesh/x3d_load.h
/branches/restructuring/src/HMesh/x3d_save.cpp
/branches/restructuring/src/HMesh/x3d_save.h
148 7161 d 1 h jab /branches/restructuring/src/ Moved to HMesh  
/branches/restructuring/src/HMeshUtil
147 7161 d 2 h jab /branches/restructuring/src/GLGraphics/ This is the contents of the Graphics directory moved to GLGraphics  
/branches/restructuring/src/GLGraphics
/branches/restructuring/src/GLGraphics/GLViewController.cpp
/branches/restructuring/src/GLGraphics/GLViewController.h
/branches/restructuring/src/GLGraphics/Makefile
/branches/restructuring/src/GLGraphics/QuatTrackBall.cpp
/branches/restructuring/src/GLGraphics/QuatTrackBall.h
/branches/restructuring/src/GLGraphics/SimpleTrackBall.cpp
/branches/restructuring/src/GLGraphics/SimpleTrackBall.h
/branches/restructuring/src/GLGraphics/gel_gl.h
/branches/restructuring/src/GLGraphics/gel_glu.h
/branches/restructuring/src/GLGraphics/gel_glut.h
146 7161 d 2 h jab /branches/restructuring/src/Graphics/ Removing all contents from Graphics - moving it to GlGraphics  
/branches/restructuring/src/Graphics/GLViewController.cpp
/branches/restructuring/src/Graphics/GLViewController.h
/branches/restructuring/src/Graphics/Makefile
/branches/restructuring/src/Graphics/QuatTrackBall.cpp
/branches/restructuring/src/Graphics/QuatTrackBall.h
/branches/restructuring/src/Graphics/SimpleTrackBall.cpp
/branches/restructuring/src/Graphics/SimpleTrackBall.h
/branches/restructuring/src/Graphics/gel_gl.h
/branches/restructuring/src/Graphics/gel_glu.h
/branches/restructuring/src/Graphics/gel_glut.h
145 7166 d 4 h /branches/restructuring/ This commit was manufactured by cvs2svn to create branch
'restructuring'.		  
/branches/restructuring
/branches/restructuring/bin
144 7166 d 4 h jab /trunk/src/ No real change to Mat4x4f.cpp, gel.doxygen is a duplicate.  
/trunk/src/gel.doxygen
/trunk/src/CGLA/Mat4x4f.cpp
136 7168 d 21 h jab /trunk/ Many small changes. Many instances of int have been replaced with size_t which
should be more correct - it emphasizes that only unsigned ints are legal.

A few changes to the documentation have been made. Coding conventions doc
updated.		  
/trunk/doc/CodingConventions.txt
/trunk/doc/Doxyfile
/trunk/makefiles/Linux_i686_g++.mk
/trunk/src/CGLA/statistics.h
/trunk/src/Geometry/GradientFilter.cpp
/trunk/src/Geometry/IndexedFaceSet.h
/trunk/src/Geometry/Polygonizer.cpp
/trunk/src/Geometry/QEM.h
/trunk/src/Geometry/TriMesh.cpp
/trunk/src/Geometry/TriMesh.h
/trunk/src/Graphics/QuatTrackBall.cpp
/trunk/src/HMesh/Manifold.cpp
/trunk/src/HMesh/Manifold.h
/trunk/src/HMeshUtil/fair_polygonize.cpp
/trunk/src/HMeshUtil/mesh_optimization.cpp
/trunk/src/HMeshUtil/obj_save.cpp
/trunk/src/HMeshUtil/triangulate.cpp
/trunk/src/HMeshUtil/triangulate_face_order.cpp
/trunk/src/HMeshUtil/x3d_load.cpp
/trunk/src/HMeshUtil/x3d_save.cpp
/trunk/src/IMesh/compute_normals.cpp
/trunk/src/LinAlg/LinAlgIO.cpp
/trunk/src/Util/Parse.cpp
134 7170 d 2 h bj /trunk/src/Graphics/ fixed bug under win32  
/trunk/src/Graphics/GLViewController.cpp
133 7173 d 14 h jab /trunk/src/HMesh/ Added some documentation.  
/trunk/src/HMesh/Manifold.h
132 7175 d 0 h jab /trunk/ minor changes. These programs now include the new gel_gl.h gel_glu.h and
gel_glut.h headers instead of the normal GL headers. Easier portability.		  
/trunk/apps/IMeshViewer/trimesh_viewer.cpp
/trunk/apps/OBJViewer/objview.cpp
/trunk/src/Geometry/Texmap.h
/trunk/src/Geometry/TriMesh.cpp
/trunk/test/CGLA-ogl/ogl_test.cpp
131 7175 d 0 h jab /trunk/src/Graphics/ Added three header files which include gl.h glu.h and glut.h respectively.
The advantage is that these header files encapsulate the ifdefs required
to sort out the platform dependencies.

Files that previously included gl.h directly now include these files.		  
/trunk/src/Graphics/gel_gl.h
/trunk/src/Graphics/gel_glu.h
/trunk/src/Graphics/gel_glut.h
/trunk/src/Graphics/GLViewController.cpp
/trunk/src/Graphics/QuatTrackBall.cpp
/trunk/src/Graphics/SimpleTrackBall.cpp
129 7180 d 3 h jab /trunk/src/ Merged the branch which does _not_ assume that we can construct a list
iterator with argument 0. It seems to work fine.		  
/trunk/src/CGLA/CGLA.h
/trunk/src/HMesh/Face.cpp
/trunk/src/HMesh/Face.h
/trunk/src/HMesh/HalfEdge.cpp
/trunk/src/HMesh/HalfEdge.h
/trunk/src/HMesh/Vertex.cpp
/trunk/src/HMesh/Vertex.h
/trunk/src/HMesh/templates.h
/trunk/src/HMeshUtil/build_manifold.cpp
/trunk/src/Util/ResourceManager.h
125 7181 d 3 h jab /trunk/ Many small changes to allow GEL to compile on Mac OS X 10.4. Incidentally,
this version of OS X is based on gcc 4.0, so problems with this version of
gcc should also have been fixed now.		  
/trunk/apps/IMeshViewer/trimesh_viewer.cpp
/trunk/apps/OBJViewer/objview.cpp
/trunk/makefiles/Darwin_Power_Macintosh_g++.mk
/trunk/src/CGLA/ArithVec3Float.cpp
/trunk/src/CGLA/ArithVecFloat.h
/trunk/src/Geometry/HGrid.h
/trunk/src/Geometry/KDTree.h
/trunk/src/Geometry/RGrid.h
/trunk/src/Geometry/Texmap.cpp
/trunk/src/Geometry/Texmap.h
/trunk/src/Geometry/save_raw.h
/trunk/src/Graphics/GLViewController.cpp
/trunk/src/Graphics/QuatTrackBall.cpp
/trunk/src/Graphics/SimpleTrackBall.cpp
/trunk/src/HMeshUtil/fair_polygonize.cpp
/trunk/src/LinAlg/Vector.h
/trunk/test/CGLA-ogl/ogl_test.cpp
118 7182 d 21 h jab /trunk/src/HMeshUtil/ Fixed some problems in smoothing.  
/trunk/src/HMeshUtil/smooth.cpp
117 7184 d 5 h bj /trunk/src/CGLA/ added () access to components  
/trunk/src/CGLA/ArithVec.h
116 7184 d 13 h jab /trunk/src/CGLA/ Accepts smaller eigenvalues ... is that good  
/trunk/src/CGLA/eigensolution.cpp
115 7186 d 23 h jab /trunk/ A few changes to ensure 64 bit portability.  
/trunk/apps/BoundaryCollapse/Makefile
/trunk/doc/CGLA-usage.tex
/trunk/src/HMesh/Manifold.cpp
/trunk/src/HMesh/templates.h
/trunk/src/HMeshUtil/fair_polygonize.cpp
113 7190 d 17 h jab /trunk/ Some changes to the documentation.
There was a problem with double versions of the templates in 3x3 and 4x4
matrices.		  
/trunk/Makefile
/trunk/src/CGLA/ArithSqMat3x3Float.cpp
/trunk/src/CGLA/ArithSqMat4x4Float.cpp
/trunk/src/CGLA/Vec3Hf.h
/trunk/src/HMesh/Manifold.cpp
/trunk/src/HMesh/Manifold.h
/trunk/src/gel.doxygen
112 7190 d 18 h jab /trunk/src/CGLA/ The double version of these templates was missing.  
/trunk/src/CGLA/ArithSqMat3x3Float.cpp
/trunk/src/CGLA/ArithSqMat4x4Float.cpp
106 7193 d 20 h bj /trunk/ refactoring med MPC  
/trunk/apps/CGLA-test
/trunk/apps/Geometry-test
/trunk/apps/HMesh
/trunk/apps/IMesh
/trunk/apps/LinAlg-test
/trunk/apps/UtilTest
/trunk/GEL.sln
/trunk/src/CGLA/CGLA.vcproj
/trunk/src/Geometry/Geometry.vcproj
/trunk/src/Graphics/Graphics.vcproj
/trunk/src/HMesh/HMesh.vcproj
/trunk/src/HMeshUtil/HMeshUtil.vcproj
/trunk/src/IMesh/IMesh.vcproj
/trunk/src/IMeshUtil/IMeshUtil.vcproj
/trunk/src/LinAlg/LinAlg.vcproj
/trunk/src/Util/Util.vcproj
104 7193 d 20 h jab /trunk/src/HMesh/ Some bug fixes to flip_edge and insert_vertex.  
/trunk/src/HMesh/Manifold.cpp
103 7194 d 1 h bj /trunk/src/ "fixed" most warnings when compiling with MSVC.  
/trunk/src/HMesh/Face.cpp
/trunk/src/HMesh/HalfEdge.cpp
/trunk/src/HMesh/Vertex.cpp
/trunk/src/HMeshUtil/fair_polygonize.cpp