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191 7143 d 9 h jab /trunk/ So some changes have been made. Things are partly foobar in the volume
polygonizer and the trilinfilter. There is a dilemma - it is hard to
allow trilinear interpolation of vectors while disallowing gradient
computation of unsigned entities.		  
/trunk/apps/VolumePolygonize/volpoly.cpp
/trunk/src/Geometry/GradientFilter.cpp
/trunk/src/Geometry/TrilinFilter.cpp
/trunk/src/Geometry/TrilinFilter.h
/trunk/src/Geometry/load_raw.cpp
/trunk/src/HMesh/volume_polygonize.cpp
190 7153 d 8 h bj /trunk/ updated vcproj/sln files  
/trunk/GEL.sln
/trunk/apps/BloomenthalPolygonize/BloomenthalPolygonize.vcproj
/trunk/apps/BoundaryCollapse/BoundaryCollapse.vcproj
/trunk/apps/Decimator/Decimator.vcproj
/trunk/apps/OBJViewer/OBJViewer.vcproj
/trunk/apps/VolumePolygonize/VolumePolygonize.vcproj
/trunk/src/CGLA/CGLA.vcproj
/trunk/src/GLGraphics/GLGraphics.vcproj
/trunk/src/Geometry/Geometry.vcproj
/trunk/src/HMesh/HMesh.vcproj
/trunk/src/LinAlg/LinAlg.vcproj
/trunk/src/Util/Util.vcproj
/trunk/test/CGLA-covariance/CGLA_covariance.vcproj
/trunk/test/CGLA-mat/CGLA_mat.vcproj
/trunk/test/CGLA-ogl/CGLA_ogl.vcproj
/trunk/test/CGLA-simple/CGLA_simple.vcproj
/trunk/test/CGLA-vec/CGLA_vec.vcproj
/trunk/test/Geometry-kdtree/Geometry_kdtree.vcproj
/trunk/test/LinAlg-leastsq/LinAlg_leastsq.vcproj
/trunk/test/Util-resman/Util_resman.vcproj
189 7156 d 2 h jab /trunk/ Fixed a bad bad bug in Mat3x3f - some fields in generated rotation
matrices were undefined.

The Makefile now works on Linux - it should be made to work on at least
OSX and Linux - the problem is the shared libs.		  
/trunk/Makefile
/trunk/src/CGLA/Mat3x3f.cpp
188 7157 d 20 h bj /trunk/src/CGLA/ fixed merge error  
/trunk/src/CGLA/Quaternion.cpp
/trunk/src/CGLA/Quaternion.h
186 7164 d 2 h jab /trunk/src/ Fixed a bug in gel_glut.h and made TrilinFilter more portable.  
/trunk/src/GLGraphics/gel_glut.h
/trunk/src/Geometry/TrilinFilter.h
184 7164 d 7 h jab /trunk/src/Geometry/ Some changes to the trilinfilter. For instance, the gradient can now be
computed.		  
/trunk/src/Geometry/TrilinFilter.cpp
/trunk/src/Geometry/TrilinFilter.h
183 7164 d 7 h jab /trunk/src/HMesh/ Some restructuring. fair_polygonize (h and cpp) have been removed.
The contents is now in volume polygonizei. Mostly minor changes
elsewhere.		  
/trunk/src/HMesh/volume_polygonize.cpp
/trunk/src/HMesh/volume_polygonize.h
/trunk/src/HMesh/fair_polygonize.cpp
/trunk/src/HMesh/fair_polygonize.h
/trunk/src/HMesh/Vertex.cpp
/trunk/src/HMesh/build_manifold.cpp
/trunk/src/HMesh/build_manifold.h
/trunk/src/HMesh/triangulate.cpp
/trunk/src/HMesh/triangulate.h
182 7170 d 9 h bj /trunk/ merged restructuring branch properly  
/trunk/src/HMesh/build_manifold.cpp
/trunk/src/HMesh/build_manifold.h
/trunk/src/HMesh/caps_and_needles.cpp
/trunk/src/HMesh/caps_and_needles.h
/trunk/src/HMesh/fair_polygonize.cpp
/trunk/src/HMesh/fair_polygonize.h
/trunk/src/HMesh/mesh_optimization.cpp
/trunk/src/HMesh/mesh_optimization.h
/trunk/src/HMesh/obj_load.cpp
/trunk/src/HMesh/obj_load.h
/trunk/src/HMesh/obj_save.cpp
/trunk/src/HMesh/obj_save.h
/trunk/src/HMesh/quadric_simplify.cpp
/trunk/src/HMesh/quadric_simplify.h
/trunk/src/HMesh/refine_edges.cpp
/trunk/src/HMesh/refine_edges.h
/trunk/src/HMesh/smooth.cpp
/trunk/src/HMesh/smooth.h
/trunk/src/HMesh/triangulate.cpp
/trunk/src/HMesh/triangulate.h
/trunk/src/HMesh/triangulate_face_order.cpp
/trunk/src/HMesh/x3d_load.cpp
/trunk/src/HMesh/x3d_load.h
/trunk/src/HMesh/x3d_save.cpp
/trunk/src/HMesh/x3d_save.h
/trunk/src/gel.doxygen
/trunk/GEL.sln
/trunk/apps/BloomenthalPolygonize/BloomenthalPolygonize.vcproj
/trunk/apps/BoundaryCollapse/BoundaryCollapse.vcproj
/trunk/apps/Decimator/Decimator.vcproj
/trunk/apps/OBJViewer/OBJViewer.vcproj
/trunk/apps/VolumePolygonize/VolumePolygonize.vcproj
/trunk/src/CGLA/CGLA.vcproj
/trunk/src/GLGraphics/GLGraphics.vcproj
/trunk/src/Geometry/Geometry.vcproj
/trunk/src/HMesh/HMesh.vcproj
/trunk/src/LinAlg/LinAlg.vcproj
/trunk/src/Util/Util.vcproj
/trunk/test/CGLA-covariance/CGLA_covariance.vcproj
/trunk/test/CGLA-mat/CGLA_mat.vcproj
/trunk/test/CGLA-ogl/CGLA_ogl.vcproj
/trunk/test/CGLA-simple/CGLA_simple.vcproj
/trunk/test/CGLA-vec/CGLA_vec.vcproj
/trunk/test/Geometry-kdtree/Geometry_kdtree.vcproj
/trunk/test/LinAlg-leastsq/LinAlg_leastsq.vcproj
/trunk/test/Util-resman/Util_resman.vcproj
178 7171 d 3 h bj /trunk/ merged restructuring branch  
/trunk/bin
/trunk/src/GLGraphics
/trunk/apps/IMeshViewer
/trunk/src/Geometry/Texmap.cpp
/trunk/src/Geometry/Texmap.h
/trunk/src/Graphics
/trunk/src/HMeshUtil
/trunk/src/IMesh
/trunk/src/IMeshUtil
/trunk/GEL.sln
/trunk/Makefile
/trunk/README
/trunk/apps/BloomenthalPolygonize/BloomenthalPolygonize.vcproj
/trunk/apps/BloomenthalPolygonize/Makefile
/trunk/apps/BloomenthalPolygonize/bloomenthal-polygonize.cpp
/trunk/apps/BoundaryCollapse/BoundaryCollapse.vcproj
/trunk/apps/BoundaryCollapse/Makefile
/trunk/apps/BoundaryCollapse/boundary_collapse.cpp
/trunk/apps/Decimator/Decimator.vcproj
/trunk/apps/Decimator/Makefile
/trunk/apps/Decimator/decimator.cpp
/trunk/apps/OBJViewer/Makefile
/trunk/apps/OBJViewer/OBJViewer.vcproj
/trunk/apps/OBJViewer/objview.cpp
/trunk/apps/VolumePolygonize/Makefile
/trunk/apps/VolumePolygonize/VolumePolygonize.vcproj
/trunk/apps/VolumePolygonize/volpoly.cpp
/trunk/makefiles/GELapp.mpc
/trunk/makefiles/common.mk
/trunk/makefiles/config.mk
/trunk/src/CGLA/CGLA.h
/trunk/src/CGLA/CGLA.vcproj
/trunk/src/CGLA/Quaternion.cpp
/trunk/src/CGLA/Quaternion.h
/trunk/src/Geometry/Geometry.vcproj
/trunk/src/Geometry/IndexedFaceSet.h
/trunk/src/Geometry/Material.h
/trunk/src/Geometry/TriMesh.cpp
/trunk/src/Geometry/TriMesh.h
/trunk/src/Geometry/obj_load.cpp
/trunk/src/HMesh/FaceCirculator.h
/trunk/src/HMesh/HMesh.vcproj
/trunk/src/HMesh/Manifold.cpp
/trunk/src/HMesh/Manifold.h
/trunk/src/HMesh/VertexCirculator.h
/trunk/src/LinAlg/LinAlg.vcproj
/trunk/src/Util/Util.vcproj
/trunk/test/CGLA-covariance/CGLA_covariance.vcproj
/trunk/test/CGLA-mat/CGLA_mat.vcproj
/trunk/test/CGLA-ogl/CGLA_ogl.vcproj
/trunk/test/CGLA-ogl/ogl_test.cpp
/trunk/test/CGLA-simple/CGLA_simple.vcproj
/trunk/test/CGLA-vec/CGLA_vec.vcproj
/trunk/test/CGLA-vec/Makefile
/trunk/test/Geometry-kdtree/Geometry_kdtree.vcproj
/trunk/test/LinAlg-leastsq/LinAlg_leastsq.vcproj
/trunk/test/Util-resman/Util_resman.vcproj
171 7174 d 8 h bj /trunk/src/CGLA/ added make_rot(Mat4x4f)  
/trunk/src/CGLA/Quaternion.cpp
/trunk/src/CGLA/Quaternion.h
166 7185 d 3 h bj /trunk/src/HMeshUtil/  
/trunk/src/HMeshUtil/test2.txt
165 7185 d 3 h bj /trunk/src/HMeshUtil/  
/trunk/src/HMeshUtil/test2.txt
/trunk/src/HMeshUtil/test.txt
164 7185 d 3 h bj /trunk/src/HMeshUtil/  
/trunk/src/HMeshUtil/test.txt
163 7185 d 3 h bj /trunk/src/HMeshUtil/ test  
/trunk/src/HMeshUtil/caps_and_needles.h
144 7212 d 10 h jab /trunk/src/ No real change to Mat4x4f.cpp, gel.doxygen is a duplicate.  
/trunk/src/gel.doxygen
/trunk/src/CGLA/Mat4x4f.cpp
136 7215 d 3 h jab /trunk/ Many small changes. Many instances of int have been replaced with size_t which
should be more correct - it emphasizes that only unsigned ints are legal.

A few changes to the documentation have been made. Coding conventions doc
updated.		  
/trunk/doc/CodingConventions.txt
/trunk/doc/Doxyfile
/trunk/makefiles/Linux_i686_g++.mk
/trunk/src/CGLA/statistics.h
/trunk/src/Geometry/GradientFilter.cpp
/trunk/src/Geometry/IndexedFaceSet.h
/trunk/src/Geometry/Polygonizer.cpp
/trunk/src/Geometry/QEM.h
/trunk/src/Geometry/TriMesh.cpp
/trunk/src/Geometry/TriMesh.h
/trunk/src/Graphics/QuatTrackBall.cpp
/trunk/src/HMesh/Manifold.cpp
/trunk/src/HMesh/Manifold.h
/trunk/src/HMeshUtil/fair_polygonize.cpp
/trunk/src/HMeshUtil/mesh_optimization.cpp
/trunk/src/HMeshUtil/obj_save.cpp
/trunk/src/HMeshUtil/triangulate.cpp
/trunk/src/HMeshUtil/triangulate_face_order.cpp
/trunk/src/HMeshUtil/x3d_load.cpp
/trunk/src/HMeshUtil/x3d_save.cpp
/trunk/src/IMesh/compute_normals.cpp
/trunk/src/LinAlg/LinAlgIO.cpp
/trunk/src/Util/Parse.cpp
134 7216 d 8 h bj /trunk/src/Graphics/ fixed bug under win32  
/trunk/src/Graphics/GLViewController.cpp
133 7219 d 19 h jab /trunk/src/HMesh/ Added some documentation.  
/trunk/src/HMesh/Manifold.h
132 7221 d 6 h jab /trunk/ minor changes. These programs now include the new gel_gl.h gel_glu.h and
gel_glut.h headers instead of the normal GL headers. Easier portability.		  
/trunk/apps/IMeshViewer/trimesh_viewer.cpp
/trunk/apps/OBJViewer/objview.cpp
/trunk/src/Geometry/Texmap.h
/trunk/src/Geometry/TriMesh.cpp
/trunk/test/CGLA-ogl/ogl_test.cpp
131 7221 d 6 h jab /trunk/src/Graphics/ Added three header files which include gl.h glu.h and glut.h respectively.
The advantage is that these header files encapsulate the ifdefs required
to sort out the platform dependencies.

Files that previously included gl.h directly now include these files.		  
/trunk/src/Graphics/gel_gl.h
/trunk/src/Graphics/gel_glu.h
/trunk/src/Graphics/gel_glut.h
/trunk/src/Graphics/GLViewController.cpp
/trunk/src/Graphics/QuatTrackBall.cpp
/trunk/src/Graphics/SimpleTrackBall.cpp

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