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/* ----------------------------------------------------------------------- *
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 * This file is part of GEL, http://www.imm.dtu.dk/GEL
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 * Copyright (C) the authors and DTU Informatics
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 * For license and list of authors, see ../../doc/intro.pdf
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 * ----------------------------------------------------------------------- */
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#include "statistics.h"
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#include "statistics.h"
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#include "Mat2x2f.h"
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#include "Mat2x2f.h"
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#include "Mat3x3f.h"
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#include "Mat3x3f.h"
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#include "Mat4x4f.h"
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#include "Mat4x4f.h"
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#include "Mat2x2d.h"
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#include "Mat2x2d.h"
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#include "Mat3x3d.h"
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#include "Mat3x3d.h"
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#include "Mat4x4d.h"
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#include "Mat4x4d.h"
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using namespace std;
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using namespace std;
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namespace CGLA
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namespace CGLA
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{
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{
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	template<class VT, class MT>
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	template<class VT, class MT>
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	VT covariance(const vector<VT>& vec, MT& C_out)
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	VT covariance(const vector<VT>& vec, MT& C_out)
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	{
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	{
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		VT m = mean(vec);
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		VT m = mean(vec);
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		unsigned int n = vec.size();
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		size_t n = vec.size();
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		MT C(0);
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		MT C(0);
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		for(unsigned int i=0;i<n;++i)
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		for(size_t i=0;i<n;++i)
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		{
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		{
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			MT B;
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			MT B;
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			VT v = vec[i]-m;
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			VT v = vec[i]-m;
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			outer_product(v,v,B);
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			outer_product(v,v,B);
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			C += B;
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			C += B;
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		}
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		}
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		C_out = C;
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		C_out = C;
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		return m;
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		return m;
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	}
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	}
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	template
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	template
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	Vec2f covariance<Vec2f,Mat2x2f>(const vector<Vec2f>& vec, Mat2x2f& C_out);
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	Vec2f covariance<Vec2f,Mat2x2f>(const vector<Vec2f>& vec, Mat2x2f& C_out);
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	template
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	template
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	Vec3f covariance<Vec3f,Mat3x3f>(const vector<Vec3f>& vec, Mat3x3f& C_out);
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	Vec3f covariance<Vec3f,Mat3x3f>(const vector<Vec3f>& vec, Mat3x3f& C_out);
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	template
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	template
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	Vec4f covariance<Vec4f,Mat4x4f>(const vector<Vec4f>& vec, Mat4x4f& C_out);
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	Vec4f covariance<Vec4f,Mat4x4f>(const vector<Vec4f>& vec, Mat4x4f& C_out);
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	template
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	template
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	Vec2d covariance<Vec2d,Mat2x2d>(const vector<Vec2d>& vec, Mat2x2d& C_out);
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	Vec2d covariance<Vec2d,Mat2x2d>(const vector<Vec2d>& vec, Mat2x2d& C_out);
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	template
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	template
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	Vec3d covariance<Vec3d,Mat3x3d>(const vector<Vec3d>& vec, Mat3x3d& C_out);
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	Vec3d covariance<Vec3d,Mat3x3d>(const vector<Vec3d>& vec, Mat3x3d& C_out);
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	template
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	template
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	Vec4d covariance<Vec4d,Mat4x4d>(const vector<Vec4d>& vec, Mat4x4d& C_out);
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	Vec4d covariance<Vec4d,Mat4x4d>(const vector<Vec4d>& vec, Mat4x4d& C_out);
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}
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}
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